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15 results for “protein”
RankRepository7 daysStars24h gainScore
01

PacesaLab/BindCraft2

Python#3714 overall

Easy to use suite for designing a wide range of protein binder modalities.

7 daysStars47424h gain0Score0.8
02

ncbi/icn3d

JavaScript#12303 overall

web-based protein structure viewer and analysis tool interactively or in batch mode

7 daysStars17424h gain-Score0.0
03

rdk/p2rank

Groovy#13509 overall

P2Rank: Protein-ligand binding site prediction from protein structure based on machine learning.

7 daysStars45924h gain-Score0.0
04

arpcard/rgi

Python#14160 overall

Resistance Gene Identifier (RGI). Software to predict resistomes from protein or nucleotide data, including metagenomics data, based on homology and SNP models.

7 daysStars43424h gain-Score0.0
05

Gaius-Augustus/BRAKER

Perl#17160 overall

BRAKER is a pipeline for fully automated prediction of protein coding gene structures with GeneMark-ES/ET/EP/ETP and AUGUSTUS in novel eukaryotic genomes

7 daysStars46324h gain-Score0.0
06

sokrypton/ColabFold

Jupyter Notebook#24100 overall

Making Protein folding accessible to all!

7 daysStars2.9k24h gain-Score0.0
07

sokrypton/ColabDesign

Python#25392 overall

Making Protein Design accessible to all via Google Colab!

7 daysStars94724h gain-Score0.0
08

steineggerlab/foldcomp

C++#26415 overall

Compressing protein structures effectively with torsion angles

7 daysStars19424h gain-Score0.0
09

wolberlab/OpenMMDL

Python#27386 overall

Interface to OpenMM for easy setup of molecular dynamic simulations of protein-ligand complexes

7 daysStars17124h gain-Score0.0
10

generatebio/chroma

Python#29384 overall

A generative model for programmable protein design

7 daysStars83424h gain-Score0.0
11

gbouras13/phold

Python#29811 overall

Phage Annotation using Protein Structures

7 daysStars16724h gain-Score0.0
12

westlake-repl/SaprotHub

Jupyter Notebook#31468 overall

Making Protein Language Modeling Accessible to All Biologists

7 daysStars17024h gain-Score0.0
13

microsoft/bioemu

Python#33305 overall

Inference code for scalable emulation of protein equilibrium ensembles with generative deep learning

7 daysStars89924h gain-Score0.0
14

David-OConnor/molchanica

Rust#33645 overall

Protein and molecule viewer, editor, simulator

7 daysStars14224h gain-Score0.0
15

NVIDIA-BioNeMo/Proteina-Complexa

Python#40095 overall

Generative model for protein binder design for protein and small molecule targets. Combines a pretrained flow-based generative model (built on La-Proteina) with inference-time optimization.

7 daysStars44324h gain-Score0.0